ADVANCED: This article describes how to update your USB drivers on certain systems to allow higher current charging if only one device is plugged into that group of ports. I will be updating this as i go along but this works on my PC's with ASUS motherboards ( ASUS and HP ) and so far it is working on my Lenovo Thinkpad T400. This may provide the perfect marriage with the Y USB power splitter cables. If anyone has pinout for one of these cables, please contact me. Amazon and other vendors sell such cables but I'm curious as to the construction. Just marrying the +/- 5V does not appear to be correct. DISCLAIMER: warning, there is a chance that this could burn out your USB port or device, though most good boards should protect themselves. Not responsible for damages, no warranty expressed or implied, risk of fire, etc.
This seems to work on boards with Intel ICH9 and 10 chipsets. ASUS has published a driver update that seems to work on some boards with Intel USB root hubs. I have not tested it yet with the iPad battery below 80% where it would draw more power but it worked in the top end. I was able to have the device awake playing Pandora and it shows charging AND the battery level increased. When I attempted to plug it into a port where there was another USB device on the same 'hub' it disabled the internal hub and both devices lost power. Was able to reset it and separated out all my devices.